- DeepImpute: an accurate, fast, and scalable deep neural network method to impute single-cell RNA-seq data
- DeepImpute: an accurate, fast, and scalable deep neural network method to impute single-cell RNA-seq data
- CSMD: A computational subtraction-based microbiome discovery pipeline for species-level characterization of clinical metagenomic samples
- Inferring subgroup specific driver genes from heterogeneous cancer samples via subspace learning with subgroup indication
- Topological data analysis quantifies biological nano-structure from single molecule localization microscopy
- Dissociation of solid tumor tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase-associated stress responses
- ยต-ANT: Semantic Microaggregation-based Anonymization Tool
- DPre: Computational identification of differentiation bias and genes underlying cell type conversions
- Patch-DCA: Improved Protein Interface Prediction by utilizing Structural Information and Clustering DCA scores
- Matched Forest: Supervised Learning for High-dimensional Matched Case-Control Studies
- SDA: a semi-parametric differential abundance analysis method for metabolomics and proteomics data
- Dissociation of solid tumor tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase-associated stress responses
- Publisher Correction to: Three-dimensional tumor growth in time-varying chemical fields: a modeling framework and theoretical study
- A novel constrained reconstruction model towards high-resolution sub-tomogram averaging
- SpliceLauncher: a tool for detection, annotation and relative quantification of alternative junctions from RNAseq data
- Computationally Predicted Gene Regulatory Networks in Molluscan Biomineralisation Identify Extracellular Matrix Production and Ion Transportation Pathways
- Global impact of somatic structural variation on the DNA methylome of human cancers
- Global impact of somatic structural variation on the DNA methylome of human cancers
- Robust structure measures of metabolic networks that predict prokaryotic optimal growth temperature
- doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows
Whats new in Bioinformatics
Genome Biology
- DeepImpute: an accurate, fast, and scalable deep neural network method to impute single-cell RNA-seq data
- Dissociation of solid tumor tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase-associated stress responses
- Global impact of somatic structural variation on the DNA methylome of human cancers
- Birth, expansion, and death of VCY-containing palindromes on the human Y chromosome
- MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions
- Benchmarking comes of age
- Correction to: African evolutionary history inferred from whole genome sequence data of 44 indigenous African populations
- Identifying significantly impacted pathways: a comprehensive review and assessment
- Benchmark of computational methods for predicting microRNA-disease associations
- Convergence of human and Old World monkey gut microbiomes demonstrates the importance of human ecology over phylogeny