- MRLR: unraveling high-resolution meiotic recombination by linked reads
- A Sequential Algorithm to Detect Diffusion Switching along Intracellular Particle Trajectories
- Reversible Jump MCMC for Multi-Model Inference in Metabolic Flux Analysis
- PatientExploreR: an extensible application for dynamic visualization of patient clinical history from Electronic Health Records in the OMOP Common Data Model Title
- Correction to: RNA G-quadruplexes at upstream open reading frames cause DHX36- and DHX9-dependent translation of human mRNAs
- DDmap: a MATLAB package for the double digest problem using multiple genetic operators
- Correction to: RNA G-quadruplexes at upstream open reading frames cause DHX36- and DHX9-dependent translation of human mRNAs
- Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato
- Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato
- FastProNGS: fast preprocessing of next-generation sequencing reads
- Laboratory information management software for engineered mini-protein therapeutic workflow
- Performance assessment of variant calling pipelines using human whole exome sequencing and simulated data
- Machine learning with the TCGA-HNSC dataset: improving usability by addressing inconsistency, sparsity, and high-dimensionality
- Aneuvis: web-based exploration of numerical chromosomal variation in single cells
- POsitive Multistate Protein design
- CoCoScore: Context-aware co-occurrence scoring for text mining applications using distant supervision
- GeneNoteBook, a collaborative notebook for comparative genomics
- GMSimpute: a generalized two-step Lasso approach to impute missing values in label-free mass spectrum analysis
- iScore: A novel graph kernel-based function for scoring protein-protein docking models
- Testing Clonal Relatedness of Two Tumors from the Same Patient based on their Mutational Profiles: update of the Clonality R Package
Whats new in Bioinformatics
Genome Biology
- Correction to: RNA G-quadruplexes at upstream open reading frames cause DHX36- and DHX9-dependent translation of human mRNAs
- Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato
- Correction to: VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer
- Current status and applications of genome-scale metabolic models
- Invasive DNA elements modify the nuclear architecture of their insertion site by KNOT-linked silencing in Arabidopsis thaliana
- Codon usage optimization in pluripotent embryonic stem cells
- A practical guide to methods controlling false discoveries in computational biology
- Single-cell transcriptomics unveils gene regulatory network plasticity
- Haplotype-aware diplotyping from noisy long reads
- Collateral damage: benchmarking off-target effects in genome editing